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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939126.1_cds_XP_016483809.1_74888
CDS Infomation

[gene=LOC107804427] [db_xref=GeneID:107804427] [protein=sporulation-specific protein 1-like] [protein_id=XP_016483809.1] [location=complement(join(35043..35081,35267..35318,35399..35460,35794..35840,35993..36035,36106..36222,36757..36833,36977..37053,37707..37973,38837..38910,39120..39242,39348..39410,39558..39623,39728..39898,39965..40033,40134..40215,40299..40343,40466..40590,41049..41303,42453..42620))] [gbkey=CDS]
Sequence

ATGGAACAACTATCAGAGAAAAAGTTCCCTGTCAATGCGAAAGATTATAAGTTATATGAA
GAAGTTGGAGACGGTGTTAGTGCAACTGTGTATCGGGCTCTGTGCATTCCTCTTAATGAG
ATTGTTGCAATCAAGGTTCTGGATTTGGAAAAGTGCAACAATGACCTGGATGGAATCCGG
AGAGAGGTGCAGACCATGATCTTGATTGATCATGCAAATGTATTGCGTGCACACTGTTCC
TTCACTGCAGGTCACAGCCTTTGGGTTGTCATGCCATTCATGGCCGGAGGATCTTGCCTT
CATATTATGAAATCTTCTTATCCTGATGGTTTTGAGGAGCCTGTAATTGCCACATTATTG
CGCGAGGTCCTCAAAGCCCTTGTATATCTTCATTACCATGGACACATACATAGAGATGTA
AAGGCTGGGAATATTTTGATTGATTCCGATGGTGCTGTTAAATTGGCAGATTTTGGAGTT
GCAGCTTGCATGTTTGATACTGGTGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACT
CCATGCTGGATGGCTCCTGAAGTGATGCAGCAACTGCATGGATATGATTTTAAAGCAGAT
ATTTGGTCGTTTGGAATAACAGCCCTTGAACTTGCTCATGGTCATGCGCCATTCTCCAAG
TACCCACCCATGAAGGTTCTGCTGATGACCTTACAGAATGCACCCCCAGGCCTTGACTAT
GAACGGGACAAGAGATTCTCCAAGTCTTTTAAAGAAATGGTTGCTGCTTGCTTAGTGAAA
GATCCAAAGAAGCGGCCATCTTCTGAGAAGCTTTTGAAGCACCCTTTCTTTAAACAAGCA
CGATCAAATGATTATTTGGCACGTTCAATCCTTGATGGCCTCCCACCTCTAGGTGATCGT
TTTAGGATGCTTAAGGCAAAAGAAGCAGATTATCTCTTACAGAACAAGGCAATGTATGAG
GACGAGGATCAGTTATCACAGTCTTTTTGTTTATTTATACTCATAACGCTNAACCTGGAG
GATCTGAAGAGCCAAGCTGCGCTGCTTCCGGATTATGACGACATTCCAGATGCTGAAGAT
TCAAGTACTAGTGGGAAGCTGCGGGAGGGGAATAGTGATATTGGTTCTATAGCAGAAAGG
CCTAATCAGCCAAGTGTTTCTCATGAGGATGAGCTGAATGATGATCATGATTTGGACAGT
TCACTTGCTGCATTTCCTATTAAGCCTCTTCAAGCACTCAAGGGGTGTTTTGATGTGTGC
GAAGATGACATAACTTCTAGTAGTCCAAGTTGGGAAGATGCTATGCAATCAGAGTCTAAT
CAGCAGAACTTTATGCTGTCACCAGCAAAAGTTGAGGACCAAGACAATGGAAAAGATGAT
GGTGAGAATCTGCGACAGAGTAGCTCCTTGCCACGTTCTGTTATTCCAGGGCATAAAAAG
TTTTTTAGTGGTTCACTGCTACAGGATAATGCTCTTTCACCCAAAAAAGTTGTTACTGAT
GGCGAGAGGGAATATCAACATCCAAAGTACCAGGCTGAACGAAACTATAGCGGTCCATTG
CAGTATCGACATAAGAAAGACTTAGGAGAAGATGCATCAGAAGGAGCTGTCGTCCAACGC
AAGGGACGTTTTCAAGTCACATCAGCAGATCTGAGTCCCAAGGAACCTACAAGCTGTTTC
TTTAACCCAGGTCATGGAGGTTCTACTAGTCCAAGCAATCTAGTTGCTTCACTACTTCCA
TCATTGCAATGCATTCTACAGCAGAATACTTTGCAAAGGGAGGAAATAGTGAAACTGATC
AAGTTTGCGGAGCGAGCATCTGTCAATCCTACAGACTTGGCTGAAGCTGGGACCAGTGAT
CTTCCACAGATGTCTCCTCCTTCTGTTAGGGAGAGAGAATTGCAATCTATGGTCATTCAA
ATGCAACAAAGCATTGGAAGTCTTGTGGAGGAGTTGCAGAGACAAAAGATGAAGAATATT
CAGTTGGAAAAGAAATTGAATACAGTGGTGAAGAAAGAATAG

Peptide Sequence

PEP ID

XP_016483809.1
PEP Infomation

PREDICTED: sporulation-specific protein 1-like [Nicotiana tabacum]
Sequence

MEQLSEKKFPVNAKDYKLYEEVGDGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR
REVQTMILIDHANVLRAHCSFTAGHSLWVVMPFMAGGSCLHIMKSSYPDGFEEPVIATLL
REVLKALVYLHYHGHIHRDVKAGNILIDSDGAVKLADFGVAACMFDTGDRQRSRNTFVGT
PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY
ERDKRFSKSFKEMVAACLVKDPKKRPSSEKLLKHPFFKQARSNDYLARSILDGLPPLGDR
FRMLKAKEADYLLQNKAMYEDEDQLSQSFCLFILITLNLEDLKSQAALLPDYDDIPDAED
SSTSGKLREGNSDIGSIAERPNQPSVSHEDELNDDHDLDSSLAAFPIKPLQALKGCFDVC
EDDITSSSPSWEDAMQSESNQQNFMLSPAKVEDQDNGKDDGENLRQSSSLPRSVIPGHKK
FFSGSLLQDNALSPKKVVTDGEREYQHPKYQAERNYSGPLQYRHKKDLGEDASEGAVVQR
KGRFQVTSADLSPKEPTSCFFNPGHGGSTSPSNLVASLLPSLQCILQQNTLQREEIVKLI
KFAERASVNPTDLAEAGTSDLPQMSPPSVRERELQSMVIQMQQSIGSLVEELQRQKMKNI
QLEKKLNTVVKKE

Transcript Sequence

Gene sequence data has not been registered.